API reference

Generated from the in-code docstrings. The package is organised as a thin orchestration layer (runner, cli, config, corpus, piecing) over the training engine (atom_hifi.training.*) and the descriptor (atom_hifi.soap_ML).

• Runner (orchestration)
• Configuration
• Focus corpus helpers
• Piecing (super-large structures)
• CLI
• Judge — cover + set-cover + microstate reference
• HiFiWorkflow — L/R scan workflow
• Clustering primitives and persistence
• Clusterer backends
• NSGA-II c-factor optimiser
• QHO σ_thermal table
• Force truth (ε_F)
• RDF δr_ref ε_noise
• Workflow persistence
• Plotting
• ED-SOAP descriptor
• Experimental: temporal assessment